affyPLM - Probe Level Models


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bg.correct.LESN LESN - Low End Signal is Noise Background corrections
boxplot,PLMset-method Class PLMset
cdfName,PLMset-method Class PLMset
coefs Class PLMset
coefs,PLMset-method Class PLMset
coefs.const Class PLMset
coefs.const,PLMset-method Class PLMset
coefs.probe Class PLMset
coefs.probe,PLMset-method Class PLMset
coefs<-,PLMset-method Class PLMset
fitPLM Fit a Probe Level Model to Affymetrix Genechip Data.
getCdfInfo,PLMset-method Class PLMset
image,PLMset-method Class PLMset
indexProbes Class PLMset
indexProbes,PLMset,character-method Class PLMset
Mbox Class PLMset
Mbox,PLMset-method Class PLMset
normalize.AffyBatch.quantiles.probeset Quantile Normalization applied to probesets
normalize.AffyBatch.scaling Scaling normalization
normalize.exprSet.contrasts Normalization applied to exprSets
normalize.exprSet.invariantset Normalization applied to exprSets
normalize.exprSet.loess Normalization applied to exprSets
normalize.exprSet.methods Normalization applied to exprSets
normalize.exprSet.qspline Normalization applied to exprSets
normalize.exprSet.quantiles Normalization applied to exprSets
normalize.exprSet.scaling Normalization applied to exprSets
normalize.scaling Scaling normalization
PLMset Class PLMset
PLMset-class Class PLMset
se Class PLMset
se,PLMset-method Class PLMset
se.const Class PLMset
se.const,PLMset-method Class PLMset
se.probe Class PLMset
se.probe,PLMset-method Class PLMset
se<-,PLMset-method Class PLMset
show,PLMset-method Class PLMset
threestep Three Step expression measures
weights,PLMset-method Class PLMset
weights<-,PLMset-method Class PLMset