aaMap |
names and characteristics of amino acids |
abstract |
Class MIAME, a class for storing microarray experiment information |
abstract,exprSet-method |
Class MIAME, a class for storing microarray experiment information |
abstract,MIAME-method |
Class MIAME, a class for storing microarray experiment information |
addNonExisting |
Add menu items to an existing/new menu of a window |
addPDF2Vig |
Add menu items to an existing/new menu of a window |
addVig2Menu |
Add menu items to an existing/new menu of a window |
addVig4Unix |
Add menu items to an existing/new menu of a window |
addVig4Win |
Add menu items to an existing/new menu of a window |
aggenv |
Class aggregator, a class of aggregators |
aggenv,aggregator-method |
Class aggregator, a class of aggregators |
aggfun |
Class aggregator, a class of aggregators |
aggfun,aggregator-method |
Class aggregator, a class of aggregators |
Aggregate |
A simple aggregation mechanism. |
aggregator-class |
Class aggregator, a class of aggregators |
annotation |
Class exprSet, a class for microarray data, and methods for processing them |
annotation,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
annotation<-,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
as.data.frame.exprSet |
converts an exprSet to a dataframe |
characterORMIAME |
Class characterORMIAME, a class to make older versions compatible |
characterORMIAME-class |
Class characterORMIAME, a class to make older versions compatible |
container-class |
container: a class that specializes the list construct of R to provide content and access control |
content |
container: a class that specializes the list construct of R to provide content and access control |
content,container-method |
container: a class that specializes the list construct of R to provide content and access control |
copyEnv |
Functionality to copy environments |
copySubstitute |
Copy between connections or from an to files with configure-like name-value substitution |
createPackage |
Create a package directory from a template, with symbol-value substitution |
env2list |
Functionality to copy environments |
esApply |
Apply for the expression data in an exprSet |
eset |
A dataset of class exprSet |
expinfo |
Class MIAME, a class for storing microarray experiment information |
expinfo,MIAME-method |
Class MIAME, a class for storing microarray experiment information |
exprMatrix-class |
Class union for objects behaving like a matrix |
exprs |
Class exprSet, a class for microarray data, and methods for processing them |
exprs,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
exprs2excel |
Class exprSet, a class for microarray data, and methods for processing them |
exprs2excel,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
exprs<-,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
exprSet |
Class exprSet, a class for microarray data, and methods for processing them |
exprSet-class |
Class exprSet, a class for microarray data, and methods for processing them |
initfun |
Class aggregator, a class of aggregators |
initfun,aggregator-method |
Class aggregator, a class of aggregators |
iter |
Methods for the generic iter. |
iter,exprSet,character,function-method |
Methods for the generic iter. |
iter,exprSet,missing,function-method |
Methods for the generic iter. |
iter,exprSet,missing,list-method |
Methods for the generic iter. |
iter-methods |
Methods for the generic iter. |
normControls |
Class MIAME, a class for storing microarray experiment information |
normControls,MIAME-method |
Class MIAME, a class for storing microarray experiment information |
notes |
Class exprSet, a class for microarray data, and methods for processing them |
notes,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
notes<-,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
package.version |
A function to report package versions |
pData |
Class exprSet, a class for microarray data, and methods for processing them |
pData,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
pData,phenoData-method |
Class phenoData, a class for patient or experiment level data. |
pData<-,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
pData<-,phenoData-method |
Class phenoData, a class for patient or experiment level data. |
phenoData |
Class exprSet, a class for microarray data, and methods for processing them |
phenoData,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
phenoData-class |
Class phenoData, a class for patient or experiment level data. |
phenoData<-,exprSet,phenoData-method |
Class exprSet, a class for microarray data, and methods for processing them |
phenoData<-,pheno |
Class phenoData, a class for patient or experiment level data. |
preproc |
Class MIAME, a class for storing microarray experiment information |
preproc,MIAME-method |
Class MIAME, a class for storing microarray experiment information |
sampleNames |
Class exprSet, a class for microarray data, and methods for processing them |
sampleNames,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
samples |
Class MIAME, a class for storing microarray experiment information |
samples,MIAME-method |
Class MIAME, a class for storing microarray experiment information |
se.exprs |
Class exprSet, a class for microarray data, and methods for processing them |
se.exprs,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
se.exprs<-,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
setOptionPdfViewer |
A function to set the PDF viewer option |
show,container-method |
container: a class that specializes the list construct of R to provide content and access control |
show,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
show,MIAME-method |
Class MIAME, a class for storing microarray experiment information |
show,phenoData-method |
Class phenoData, a class for patient or experiment level data. |
split,exprSet,vector-method |
Class exprSet, a class for microarray data, and methods for processing them |
split,phenoData,vector-method |
Class phenoData, a class for patient or experiment level data. |
[,container-method |
container: a class that specializes the list construct of R to provide content and access control |
[,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
[,phenoData-method |
Class phenoData, a class for patient or experiment level data. |
[[,container-method |
container: a class that specializes the list construct of R to provide content and access control |
[[,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
[[,phenoData-method |
Class phenoData, a class for patient or experiment level data. |
[[<-,container-method |
container: a class that specializes the list construct of R to provide content and access control |
[[<-,exprSet-method |
Class exprSet, a class for microarray data, and methods for processing them |
[[<-,phenoData-method |
Class phenoData, a class for patient or experiment level data. |