allow continous and discrete annotations for plotDispersion and projectScoreLandscape. Annotations can now be part of the score data.frame and then specified as a column name
plot themes updated
citation updated: cite the singscore manuscript
number of bins for the hexbin plot in plotLandscape is determined from the data
fixed bug in calculation of scores. Boundary calculation was previously done with all genes in the gene-set. It should be done with genes present in both the gene-set and the data (i.e. after filtering out those not measured in the data).
TotalDispersion now estimated as the mean of dispersions from the up- and down-regulated gene sets instead of the sum (previous estimate divided by 2)
singscore 1.2.2
created a website for the package
added ORCID IDs for authors
added sticker for package
singscore 0.99.9
remove internal keyword from generateNull
singscore 0.99.8
vectorize getPvals
make toy_epxr_se
singscore 0.99.5
represent expression data in SummarizedExperiement dataset
function input checkings
R code re-organised
singscore 0.99.3
change argument name bidirectional to knownDirection, default as TRUE